Questions tagged [enzyme-kinetics]

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How can some enzymes work faster than the diffusion rates of the reactants allow?

Quoting Wikipedia: "Some enzymes operate with kinetics which are faster than diffusion rates, which would seem to be impossible." Which are those enzymes and how can they be so fast? One example is ...
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3answers
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Temperature dependence of reaction rates

Is it correct to say that "Increasing the temperature will always increase the rate of any chemical reaction"? Many articles on the internet and textbooks say yes but what about biochemical reactions ...
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1answer
28 views

Michaelis menten constant motivation behind 1/2?

So the michaelis constant is defined as the substrate concentration at half maximal „reaction-speed“. I was wondering why 1/2 ? I guess for higher values you need more substrate, which could be a ...
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1answer
88 views

Hill equation with inhibition and activation

The Hill equation for an activating enzymatic interaction with cooperative multiplicity $n$ is $$\frac{\mathrm d[\ce{P}]}{\mathrm dt} = V_\mathrm{max}\frac{[\ce{S}]^n}{K_\ce{S} + [\ce{S}]^n}\tag{1}$$ ...
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2answers
41 views

Enzyme Kinetics - Given Km find substrate concentration at a certain velocity

From what I understand about the Michaelis Menten Model Km defines the amount of substrate required to reach half-saturation. 1/2 Vmax corresponds to Km on the x axis Generic formula is v = Kcat [...
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2answers
61 views

Measuring a high Michaelis constant using fluorescence

We have the task of measuring kinetic parameters of an oxidase reaction that has a $K_M$ of about $2 \,\text{mM}$. For that, we want to use a fluorescence assay based on Amplex Red. The latter is a ...
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1answer
47 views

Inactivation of enzyme: Why inactivation constants do not follow the Arrhenius equation? [closed]

The Arrhenius equation may not account for the temperature effect on thermal inactivation rate constants. Why can the thermal inactivation kinetics not be expected to follow Arrhenius? The reason that ...
2
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1answer
102 views

High concentration of ferric ion catalyst decreases rate of decomposition of hydrogen peroxide in the Fenton reaction

I did a project on the Fenton reaction and rate of decomposition of $\ce{H2O2}$. I used colorimetry to measure the rate of decolourisation of methylene blue when I mixed $\pu{5e-6 mol}$ $\ce{FeCl3}$ ...
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1answer
133 views

Why enzyme-catalyzed reactions mostly go one way?

I listened to the lecture about enzymes. Professor downplayed the question in the subject. He said that enzymes are able to work both ways, but practically speaking reactions with overwhelming ...
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1answer
47 views

How to calculate the kinetic order of an enzymatic reaction?

This question is concerning the metabolism of ethanol by an alcohol dehydrogenase enzyme. Usually people metabolize alcohol equivalent to "one beer per hour". One beer is said to contain 33cL. The ...
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1answer
38 views

Are enzymes with superior catalytic properties more sensitive to temperature changes?

I am wondering whether enzymes with superior catalytic properties are more or less temperature sensitive than average enzymes. I know that enzymes lower the activation energy, Ea. So the more ...
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1answer
28 views

Enzyme Kinetics two enzymes in complex with one substrate

Given an enzyme reaction where two enzymes are required to form the complex, for example $\ce{2E +S-> E3S->2E +P}$, how would I calculate complex concentration assuming steady state ...
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65 views

Lowest Michaelis constant Km

I want to find a lower limit of the Michaelis constant for some evaluations of Michaelis-Menten enzyme kinetics. What is the lowest $K_m$ you ever encountered? Is there a theoretical limit?
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1answer
69 views

Michaelis-Menten rate law for enzyme which catalyzes two reactions: steady state?

Suppose an enzyme $\ce{E}$ can catalyze two reactions: \begin{align} \ce{S1 + E &<=> S1E -> P1 + E} \tag{R1} \\ \ce{S2 + E &<=> S2E -> P2 + E} \tag{R2} \end{align} I want ...
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0answers
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Equations Used in Isothermal Titration Calorimetry

I have been attempting to understand and derive the formulas used for ITC which can be found here starting on page 310. I am particularly interested in the single set of identical sites. To first ...