Timeline for Generating electron density from protein coordinate (PDB)
Current License: CC BY-SA 4.0
4 events
| when toggle format | what | by | license | comment | |
|---|---|---|---|---|---|
| Jun 15, 2020 at 18:26 | vote | accept | Simon | ||
| Mar 19, 2020 at 0:42 | comment | added | Karsten♦ | @Simon I don't know Phenix, but it might be phenix.maps: phenix-online.org/pipermail/phenixbb/2010-February/014521.html. You would calculate an Fc map (something like 0 Fo + 1 Fc). | |
| Mar 18, 2020 at 23:46 | comment | added | Simon | Thank you Karsten. I am exploring Phenix and fmodel generates structure factor from pdb. However, I fail to find a way to turn structure factor into electron density. Although I can take its square norm of its fourier transform as electron density, my result will be off by some normalization constant. Do you happen to know the exact command/function? | |
| Mar 18, 2020 at 3:25 | history | answered | Karsten♦ | CC BY-SA 4.0 |