Following up on the question Units of mass on the atomic scale, Daltons (Da) and unified mass units (u) are equivalent, but which is used seems to depend on context. For example, when discussing single atoms one typically sees the mass expressed as u, but when discussing large biomolecules one typically sees Da or kDa.
Is there a rule about whether to use Da or u? Or, is this simply a matter of convention or left to the writer's choice?