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Take a look at the wavefunctions for the different energy levels of a simple harmonic oscillator (a crude approximation for a diatomic). enter image description here

The wavefunctions seem to make sense: they tend to zero as x tends to plus or minus infinity so it is normalisable. The number of nodes increases by one with increasing energy levels etc.

However, when you take a look at $|\psi(x)|^2$ which represents the probability density of the particle to be found at that point in space (or the diatomic to be in that particular state/bond length) I struggle to see how a node can exist. This is because a diatomic will stretch and contract through the full range of extension/contraction - the quantum representation does not seem to conflict this in the sense that there is a non zero probability when the potential is equal to the total energy. However, to reach this state from, for example, $x=0$ in the $n=2$ energy level it must pass through a node. What does this mean? surely a bond can't cease to exist as it stretches from equilibrium to some extended or contracted state? What's really going on here?

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However, to reach this state from, for example, x=0 in the n=2 energy level it must pass through a node.

To start, ask yourself: "What should pass through a node?" The answer is: it is the probability that "passes through the nodes", not atoms (or, I should better even say nuclei). Probability is just a mathematical quantity ant the zero value is allowed for it, so there is nothing to worry about. Yes, quantum harmonic oscillator has some forbidden regions of displacement from the equilibrium. But it can also penetrate into classically forbidden regions. Quantum world is weird.

The root of this (and most of the other) apparent quantum paradoxes is the classical way of thinking: you think that you have some funky quantum balls on a funky quantum spring out there, but you don't. Quantum harmonic oscillator is a quantum system that essentially has the Hamiltonian similar in its form to the Hamiltonian of a classical harmonic oscillator. And this is it. No balls, no springs, just a similar Hamiltonian.


It should be mentioned as well that atoms (again, more precisely, nuclei) are not vibrating in molecules even in a classical sense: their motion can be only approximately separated into vibrational and rotational ones. Besides, the vibrational motion can only approximately be treated as being harmonic.

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  • $\begingroup$ I do understand that this is a rather crude and simplistic approximation but please just suppose this was the realistic situation in a diatomic - i.e the potential well is described by $-1/2kx^2$ and the diatomic (reduced to a one body problem by utilising the reduced mass) stretches and contracts from one extreme of contraction to the extreme of stretching - i.e $x$ goes from $-x_{extremity}$ to $+x_{extremity}$. At some point in this action, it must surely pass through these nodal displacements between the extremities. I'm asking how is this so? $\endgroup$
    – RobChem
    Commented Nov 9, 2015 at 15:03
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    $\begingroup$ In your simplistic approximation where you are talking about a nuclei moving from one extreme to another (in a 1D world), yes it must pass through those points of 0 probability, but the whole point of this answer is that your simplistic approximation is the wrong way to interpret the results at this level of detail. Quantum mechanics does not treat the vibration of a diatomic molecule as a spring and mass moving one way then another, why then would we expect its predictions to retain characteristics of the spring-mass system? $\endgroup$ Commented Nov 9, 2015 at 15:21
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The conception of moving nuclei in a harmonic motion is simply wrong. At best, it shows what geometries are possible for a given mode but don't think that molecules move like this.

The $|\Psi(x)|^2dx$ tells you what the probability is to find your geometry at displacement $x$. Forget get the idea of the moving nuclei, this idea is just a simple concept to visualize normal modes but it is not suitable for quantitative assessments.

Nodes also don't mean that your molecule can't pass through that point. Generally you can never measure a single point, meaning it is impossible to measure your geometry exactly. You always have some uncertainty in your measurement apparatus which means that you always measure a range of x-values and the probability around a node does not vanish as soon as you look at small interval for x around your node.

There is one case when the approximation of a vibrating molecule is acceptable and that is for highly excited vibrational states. These states give probability distributions which are similar to classical harmonic oscillator motion. But even then it is still an approximation and you still have nodes. But the "motion" of harmonic oscillator groundstates and lower states is nothing like the classical motion.

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