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I am interested in learning organic chemistry in order to solidify my knowledge of molecular biology.

However, there are a lot of options for organic chemistry textbooks, and I plan on simply sampling a few in order to figure out which ones are best, but I thought I would also ask for some advice.

Since I am self-learning, I have some specific items on my textbook wishlist:

  • The textbook should be insightful - I don't simply want facts presented, I want to see how the facts connect together into a larger whole. Usually, teachers fulfill this task, but in this case, I will need some help from the textbook.

  • The textbook should have a good section on learning IUPAC nomenclature.

  • I don't want organic chemistry to be an experience in advanced memorization for me. The previous point helps in addressing this issue, but I would like to reiterate it. I would like to have a textbook that helps me understand why each class of reactions is important (what can one do, that the other can't?) in a chemist (or an organism's) toolbox - I don't want to be memorizing reactions, I want to be putting them into my toolbox.

With such requirements in mind, which textbooks would you recommend?

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  • $\begingroup$ FYI, I think these sorts of questions are generally considered off-topic, since they're broad and answers are invariably at least somewhat subjective. That said, I could be wrong, and I've provided an answer with my recommendations in any case. $\endgroup$
    – Greg E.
    Commented Jul 28, 2014 at 21:04
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    $\begingroup$ I'm curious why one of your focuses is IUPAC naming. If your true application is molecular biology, I think you'll find that real IUPAC naming will be used little in that context, and instead trivial or other naming systems will be used. $\endgroup$
    – jerepierre
    Commented Jul 30, 2014 at 15:00

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I'll provide a rundown of the general organic chemistry textbooks I've studied in detail:

  • Organic Chemistry, David R. Klein: A very solid introductory text. Emphasis is on expediency and development of intuition over rigorous theoretical correctness. The coverage of molecular orbital theory is extremely scant, and classic valence bond theory (with associated concept of orbital hybridization) is the major explanatory paradigm. This is probably the most accessible text for students with a minimal background, but it's also somewhat superficial.
  • Organic Chemistry, Jonathan Clayden, et al.: This is a very thorough text, with a slightly wider array of reactions discussed than Klein's textbook (most notably in the coverage of organometallic reagents). Again, the MO treatment is lacking, but it's invoked more frequently than in Klein. This book tends to delve quite deeply into the mechanisms underlying specific reactions, making it rather lengthy. There's also some superficial discussion of HSAB theory, which is mostly (if not completely) absent in Klein's book.
  • Advanced Organic Chemistry, Carey & Sundberg. This is something of a seminal classic, but it's not for the faint of heart or for those uninitiated in the fundamentals. Mechanisms are elucidated in great detail (primarily via MO theory, with results from both ab initio and semi-empirical methods), and the exposition of pericyclic reactions is notably excellent. It also contains a great deal of illuminating content on conformational analysis. This is definitely not appropriate for a first textbook, but I would consider it essential reading for advanced undergrads and above.

Ultimately, either of Klein's or Clayden's textbooks should satisfy all of your criteria, but I strongly recommend Carey & Sundberg for subsequent study, if possible.

Beyond those, I've found Fleming's Molecular Orbitals and Organic Chemical Reactions to be a very good introduction to qualitative MO theory, but it's not a general-purpose text. March's Advanced Organic Chemistry is the ultimate, all-encompassing reference manual, and I'd consider it the sine qua non of any good organic chemistry library. As an aside, McQuarrie and Atkins have both published very good physical chemistry textbooks, which in many ways have been more enlightening than any textbook specific to organic chemistry. I'm also a fan of Oxtoby's Principles of Modern Chemistry as a general chemistry textbook; its mathematical and physical rigor is incredibly admirable, even if it does sometimes lack severely in concision. I've also heard unanimous praise for Housecroft & Sharpe's Inorganic Chemistry, but I've yet to read more than a few sections of it.

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  • $\begingroup$ I find Organic Chemistry by Clayden et al. to be a fine textbook, though I'm not a chemistry major (I'm currently a lowly high school student) and just peruse it for fun. $\endgroup$ Commented Oct 4, 2014 at 6:11

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