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Apr 29 at 17:03 comment added Buttonwood Perhaps the program displays only the crystallographic motif. If this happens to coincide with a special position, the space group's symmetry operators could "complete" the molecule (for instance a centre of inversion, a mirror plane, a proper rotation axis), e.g., crystallographic models in monoclinic $P2_1/c$, orthorhombic $P2_12_12_1$ (as some of the more frequently seen ones for organic matter), or trigonal $R3c$. It then were useful to amend the question with structure code of the database, too. Perhaps just a click away (e.g., Jmol).
Apr 29 at 11:55 comment added Mithoron Quite possibly you simple got one unit in .pdb and need a file with eight.
Apr 29 at 9:20 comment added Buttonwood Suggestion: add a link to the program's source, state the version/release and release date you use, substantiate your observation by adding an illustration generated by the program. Else, how could one replicate your findings?
Apr 29 at 5:27 history asked Mike CC BY-SA 4.0