4
$\begingroup$

Suppose I had a monosaccharide, e.g. D-arabinose. Suppose I do a few synthetic steps with it, and end up with the compound methyl (2S,3R,4R)-3,5-dihydroxy-2,4-dimethoxypentanoate. (as labelled by ChemDraw. If that is not the PIN, please correct.)

However, when writing my paper/thesis/lab report, I would love to derive the base name from D-arabinose for simplicity and consistency. The monosaccharide derivatives with a carboxylic acid in place of an aldehyde are -onic acids so my base name would be methyl D-arabinonate. But how would I correctly and unambiguously label the methoxy groups?

If I used 2,4-dimethyl, that would sound like this second compound:

And if I used 2,4-dimethoxy, wouldn’t that make it this one:

Is there a trick I am missing for clearly naming the compound as above with methyl D-arabinonate as a base name?

$\endgroup$
4
  • $\begingroup$ Did you have a look at Pure Appl. Chem., 1996, 68, 1919-2008 IUPAC? $\endgroup$ Feb 4, 2016 at 16:00
  • 1
    $\begingroup$ @KlausWarzecha No, because I didn’t know it existed ^^' $\endgroup$
    – Jan
    Feb 4, 2016 at 16:34
  • $\begingroup$ How about methyl 2O, 4O-dimethylarabinoate? $\endgroup$
    – Curt F.
    Feb 4, 2016 at 16:45
  • $\begingroup$ @CurtF. After skimming across Klaus’ source, yeah, something like that. If someone who had previous experience in doing so could answer, that would be great ^^ $\endgroup$
    – Jan
    Feb 4, 2016 at 16:59

1 Answer 1

4
$\begingroup$

It is possible to name such compounds based on retained carbohydrate names in accordance with the current version of Nomenclature of Organic Chemistry – IUPAC Recommendations and Preferred Names 2013 (Blue Book) as follows.

P-102.5.6 Monosaccharide derivatives

P-102.5.6.1 O-Substitution

In order to maintain the integrity of structures and take advantage of retained names to imply the absolute configuration, O-substitution is allowed in carbohydrate nomenclature. Substituents replacing the hydrogen atom of an alcoholic hydroxy group of a monosaccharide or monosaccharide derivative are denoted as O-substituents. The substitution of an anomeric hydroxy group is discussed in P-102.5.6.3.2. The O-locant is not repeated for multiple substitution by the same atom or group. Number locants are used as necessary to specify the positions of substituents; they are not required for compounds fully substituted by identical atoms or groups.

P-102.5.6.1.1 O-Acetyl and O-alkyl functionalization.

For O-acyl derivatives, names with the acid component cited as a separate word ending in ‘ate’ after the monosaccharide name are preferred to names using O-acyl group prefixes. However when the ose ending is changed (e.g. to denote a glycosyl or an acid function having seniority over an ester) O-acyl prefixes are required. O-Alkyl derivatives are always expressed by prefixes.

Therefore, the name for the corrsponding D-arabinose derivative with methyl substituents replacing the hydrogen atoms of two alcoholic hydroxy group is 2,4-di-O-methyl-D-arabinose.

D-arabinose    2,4-di-O-methyl-D-arabinose

$\endgroup$
0

Your Answer

By clicking “Post Your Answer”, you agree to our terms of service and acknowledge you have read our privacy policy.

Not the answer you're looking for? Browse other questions tagged or ask your own question.