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### Is there a general consensus on the causes of the alpha-effect?

There have been various explanations posited for the $\alpha$-effect. The $\alpha$-effect refers to a phenomenon wherein nucleophiles with lone pairs on atoms adjacent (i.e., in the $\alpha$- ...
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### Deliquescence/efflorescence: How can I convert between salt concentration and RH?

I am looking at two phase diagrams, one has axes of $T$ and $\%\ce{MgClO4}$ in a $\ce{H2O-MgClO4}$ mix, and the other has axes of $T$ and relative humidity. The authors of the second phase diagram say ...
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### Why does hyperconjugation help for ring cleavage?

The question was to rationalize it the ring cleavage happens concerted or non-concerted. The papers "The Mechanism of the Thermal Decomposition of 1-Pyrazolines and Its Relationship to ...
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### How can I update a map/mesh and coordinates in a PyMol session file?

I have a PyMol session file I was using to create my figures. It contains a protein and ligand broken into several groups of atoms with a fair bit of overlap. There are also a few meshes built from ...
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### Carbocation stability order

I was wondering whether the following order (from here) is correct: In the first inequality, why did 9 hyperconjugations dominated resonance effect of benzene ring? In the last inequality ...
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### Relativistic effect: d-electrons in metallorganic complexes

With higher period the d-electrons of the metal are less strong bonded and therefore oxidative addition is easier for $\ce{Ir(I)}$ than for $\ce{Rh(I)}$ and much easier than for $\ce{Co(I)}$. For ...
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### Natural Bond Orbital (NBO) analyses: Physical significance/interpretation of E(2) 'stabilization energy'?

PREFACE: I am no expert on this topic. My questions at the bottom may be off base. I have some experience with symmetry-adapted perturbation theory (SAPT) when it comes to analyzing intermolecular ...
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### Molecular Imaging - Any surprises to be had?

Molecular imaging, using STM and AFM technologies, appear so far to visually prove most of what we already know about chemical structures, such as VSEPR theory. For instance, here are the ideal ...
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### Iron chemistry: acetates for ebonizing wood

I have recently been “brewing” what is commonly called “iron acetate” for ebonizing wood, and I'd like to understand the chemistry of the iron/acetic acid reaction, which should be fairly simple, but ...
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### When measuring avidity should you use the ligand concentration or the nanoparticle concentration?

Looking at avidity between a ligand-receptor, you're looking at an enhancement of the $K_d$ compared to a lone ligand. Is it more appropriate to compare the $K_d$ using the concentration of the ...
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### Why can't Pd/C and H2 reduce both the alkene and carbonyl portions of α,β-unsaturated carbonyls?

Why is it that the major product of the reduction of chalcones the ketone and not the monoalcohol? In other words, Why isn't the major product a benzyl alcohol? From what I understand, catalytic ...
522 views

### How do you calculate a unit cell's dimensions from an XRD spectra?

My inorganic lab had us do an XRD measurement, but I've never been explained how to interpret the data. Question: Calculate the unit cell dimensions $a$, $b$, and $c$, for $\ce{YBa2Cu3O7}$ from ...
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### Is it possible for a group to substitute itself?

When I first learned about substitution reactions, I started wondering something that I never ended up figuring out: Suppose you have a strong nucleophile which is also a good leaving group, such as ...