Prepare for an amazing feat of algebra! I sincerely hope there is a shorter way to the endpoint. EDIT - there is! See the end of my answer.
To calculate partial pressure, $P_{\text{He}}$, we need the total pressure $P_t$ and the fraction of the gas that is He $X_{\text{He}}$: $$P_{\text{He}}=X_{\text{He}} P_t$$
You have $PV=nRT$. $T$ is not given, so assume it is constant. $n$ is unknown, but the system is closed, so $n_x$ for each gas is constant. Thus we have:
$$PV=\text{ constant}$$
Total Pressure
It is tempting to write variations of $$P_1 V_1 = P_2 V_2$$
However, for each gas, both $P$ and $V$ are changing, so we need to consider their products: $$(PV)_1 = (PV)_2$$
Thus, as trb456 suggests, $$P_t V_t = (PV)_t \implies P_t =\frac{\sum{(PV)_i}}{\sum{V_i}}$$
Fraction of He
The fraction of the mixture that is helium is determined by the ratio $\dfrac{n_{\text{He}} }{n_t}$. Since $n=PV/RT$, and $R$ and $T$ are constant, we can write: $$X_{\text{He}}=\frac{n_{\text{He}}}{\sum{n_i}}=\frac{(PV)_{\text{He}}}{\sum{(PV)_i}}$$
At last!
$$P_{\text{He}}=X_{\text{He}} P_t = \left( \frac{(PV)_{\text{He}}}{\sum{(PV)_i}}\right) \left( \frac{\sum{(PV)_i}}{\sum{V_i}}\right)$$
$$P_{\text{He}_2}=\frac{(PV)_{\text{He}_1}}{V_t}$$
Or, as it struck me as I finished:
Helium expands to fill the total volume. Now we can use $P_1 V_1 = P_2 V_2$ and completely ignore the other gasses (there is a lot empty space for the He atoms to fit in).
$$P_{\text{He}_2}=\frac{P_{\text{He}_1}V_{\text{He}_1}}{V_t}$$
This equation is very similar to your second equation, except the subscripts are added to denote initial and final pressure of He.